Jonathan Seguin Email & Phone Number | Biologist and Bioinformatician, specialized in Genetics, Genomics and cellular Biology. Strongly interested by the study of the genetic and genomic mechanisms involved in the origin of human pathologies, and also in Evolution. Currently, I provide bioinformatic analysis of NGS datasets (RNA-seq, scRNA-seq, ChIPseq) in the study of childhood leurkemia in the group of Prof. Schwaller at the department of biomedecine in Basel. Specialization : -----Biology: DNA analysis with CGH-array, gene sequencing, quantitative PCR in multiplex on d-HPLC (MPLC) -----Computing skills: - Java (oriented-object language) - scripting languages with perl and bash - database with SQL and MySQL (in association with PHP), Oracle - NGS and statistical analysis with R - currently work on Windows and Linux environment ----- Bioinformatics : - Analysis of microarray data with R - de novo assembly of viral genome with sRNA-seq datasets - Analysis of mapping performed with of sRNA-seq, RNA-seq and ChIP-seq datasets - Analysis of scRNAseq dataset - Differential expression analysis of RNA-seq datasets - Peak-calling and Differential enrichment analysis of ChIP-seq datasets - Creation of automatic report encoded in HTML5, CSS3 and PHP5 - Development of the software MISIS for Biologist researchers (http://www.fasteris.com/apps/) languages: - English: read, written and spoken - Spanish: school level - French: native language

Jonathan Seguin

Biologist and Bioinformatician, specialized in Genetics, Genomics and cellular Biology. Strongly int...
Mulhouse, Grand Est, France

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Jonathan Seguin’s Email jonathan.seguin@unibas.ch

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Jonathan Seguin’s Location Mulhouse, Grand Est, France

Jonathan Seguin’s Current Industry University Childrens Hospital Basel

Jonathan Seguin’s Prior Industry Lnca Cnrs | University Of Basel | Eth Zurich | Igbmc | Cnrs

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Bioinformatician

2021-01-01T00:00:00.000Z - Present

Bioinformatician

2017-01-01T00:00:00.000Z - 2020-05-01T00:00:00.000Z

Post-Doc

2015-01-01T00:00:00.000Z - 2015-12-01T00:00:00.000Z

Bioinformatician

2010-02-01T00:00:00.000Z - 2011-01-01T00:00:00.000Z

Bioinformatician (6 months intership)

2009-02-01T00:00:00.000Z - 2009-07-01T00:00:00.000Z

Research associate in Biology (6 months intership)

2007-01-01T00:00:00.000Z - 2007-06-01T00:00:00.000Z

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Jonathan Seguin is a Biologist and Bioinformatician, specialized in Genetics, Genomics and cellular Biology. Strongly interested by the study of the genetic and genomic mechanisms involved in the origin of human pathologies, and also in Evolution. Currently, I provide bioinformatic analysis of NGS datasets (RNA-seq, scRNA-seq, ChIPseq) in the study of childhood leurkemia in the group of Prof. Schwaller at the department of biomedecine in Basel. Specialization : -----Biology: DNA analysis with CGH-array, gene sequencing, quantitative PCR in multiplex on d-HPLC (MPLC) -----Computing skills: - Java (oriented-object language) - scripting languages with perl and bash - database with SQL and MySQL (in association with PHP), Oracle - NGS and statistical analysis with R - currently work on Windows and Linux environment ----- Bioinformatics : - Analysis of microarray data with R - de novo assembly of viral genome with sRNA-seq datasets - Analysis of mapping performed with of sRNA-seq, RNA-seq and ChIP-seq datasets - Analysis of scRNAseq dataset - Differential expression analysis of RNA-seq datasets - Peak-calling and Differential enrichment analysis of ChIP-seq datasets - Creation of automatic report encoded in HTML5, CSS3 and PHP5 - Development of the software MISIS for Biologist researchers (http://www.fasteris.com/apps/) languages: - English: read, written and spoken - Spanish: school level - French: native language - German: notions

Jonathan Seguin has prior
experience in the following industries:
Lnca Cnrs | University Of Basel | Eth Zurich | Igbmc | Cnrs

Jonathan Seguin has the following professional experience:
University Childrens Hospital Basel | Lnca Cnrs | University Of Basel | Eth Zurich | Igbmc | Cnrs